Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892128.1_cds_XP_016447029.1_41831
CDS Infomation

[gene=LOC107772058] [db_xref=GeneID:107772058] [protein=3-phosphoinositide-dependent protein kinase 2-like] [protein_id=XP_016447029.1] [location=join(23229..23408,24121..24301,24407..24459,24662..24763,24838..24946,25040..25118,25221..25386,26794..26928,27049..27215,27584..27806,27911..27994)] [gbkey=CDS]
Sequence

ATGTTGGCATTGGAAGGTGAAATGGAGCAAGAATTTGATGCAAAGCTAAAGATTCAGAAT
AATTCAGCTCCTAATACTGCTCAGAGATCTAAGAGTTTTGCATTCAGAGCACCACAGGAG
AATTTCACAATCCAAGATTTTGAATTGGGAAAGATCTATGGTGTTGGTTCTTATTCCAAG
GTTGTTAGAGCAAAAAAGAAAGATACTGGGAATGTTTATGCGTTGAAGATCATGGACAAA
AAGTTCATCACTAAGGAAAATAAGACTGCTTATGTGAAACTAGAGCGTATTGTACTTGAT
CAGCTGGATCATCCTGGTGTTGTCCGACTATTTTTCACCTTTCAAGACACTTTTTCACTG
TATATGGCGCTTGAGTCTTGTGAAGGTGGAGAGCTTTTTGATCAAATAACAAGGAAAGGC
CGTTTGTCTGAAGACGAGGCACGCTGTTATGCAGCTGAAGTTGTAGATGCTCTTGAGTAT
ATACATAGTATGGGATTGATACATCGAGACATTAAGCCAGAGAACCTGCTTCTTACTTCA
GATGGACATATTAAAATTGCGGATTTTGGCAGCGTAAAGCCAATGCAGGATAGCAGAATA
ACAGTCCTTCCAAATGCGGCATCAGATGACAAAGCCTGTACTTTTGTGGGAACCGCTGCT
TATGTCCCTCCTGAAGTTTTAAATTCTTCTCCTGCGACTTTTGGAAATGATCTTTGGGCA
CTTGGTTGCACATTGTATCAAATGCTTTCGGGAACTTCGCCGTTTAAAGATGCCAGTGAA
TGGCTCATTTTCCAAAGAATCATTGCCAGAGATATCAGATTTCCAAATTATTTTTCAAAT
GAAGCCAGAGATCTTATTGATCAGTTGCTGGATATCGATCCTAGCAGAAGACCTGGTGCC
GGACCTGATGGTTATACTTCACTGAAAAATCATCCTTTTTTTAATGGGGTTGATTGGGAG
AAGTTAAGGTCACAAACTCCTCCAAAGCTTGCTATGGAGCCAAAAGCCCCGTCAACTCAT
AGCAGTGGCGACGAACAAGATCCTTCATGGAATCCATCGCACATTGGCGATGGTTCAGTT
AGACCTAGCGATGGAAATGGCGGTGCTGCATCAACTTCTGAAACTGGTAGCATCACCAGG
CTTGCATCGATCGACTCTTTCGATTCAAAATGGAAGCAATTTTTGGAACCGGGTGAATCC
GTTCTCATGATTTCCATGGTGAAAAAGATACAGAAACTTACAAACAAGAAAGTTCAGCTA
ATCCTAACAAATAAACCAAAGTTGATTTATGTTGATCCTTCAAAGTTGGTGATCAAAGGG
AACATTATATGGTCCGACAATCCTAATGATCTTAGTATTCAAGTTACAAGCCCTTCACAG
TTCAAGATTTGTACACCAAAGAAAGTTATGTCATTTGAGGATACTAAACAACGAGCACAG
CAGTGGAAAAAGGCGATTGAAGCTCTCCAGAACCGATGA

Peptide Sequence

PEP ID

XP_016447029.1
PEP Infomation

PREDICTED: 3-phosphoinositide-dependent protein kinase 2-like [Nicotiana tabacum]
Sequence

MLALEGEMEQEFDAKLKIQNNSAPNTAQRSKSFAFRAPQENFTIQDFELGKIYGVGSYSK
VVRAKKKDTGNVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL
YMALESCEGGELFDQITRKGRLSEDEARCYAAEVVDALEYIHSMGLIHRDIKPENLLLTS
DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWA
LGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPNYFSNEARDLIDQLLDIDPSRRPGA
GPDGYTSLKNHPFFNGVDWEKLRSQTPPKLAMEPKAPSTHSSGDEQDPSWNPSHIGDGSV
RPSDGNGGAASTSETGSITRLASIDSFDSKWKQFLEPGESVLMISMVKKIQKLTNKKVQL
ILTNKPKLIYVDPSKLVIKGNIIWSDNPNDLSIQVTSPSQFKICTPKKVMSFEDTKQRAQ
QWKKAIEALQNR

Transcript Sequence

Gene sequence data has not been registered.